>EE;Circadian-related;AAAATATCT
>CCA1 bs;Circadian-related;AAMAATCT
>CIRCADIAN;Circadian-related;CAANNNNATC
>LRE;Light-related;TGACACGTGGCA
>HY5 bs i;Light-related;RRTGACGTVD
>HY5 bs ii;Light-related;CCACGTGKCAT
>Z-box;Light-related;ATACGTGT
>JIN1 bs;Light-related;TGACACGT
>G-box i;Light-related;CACATGGCACT
>SORLIP;Light-related;GAGTGAG
>SORLEP;Light-related;TGTATATAT
>T-box;Light-related;ACTTTG
>REalpha;Light-related;AACCAA
>REbeta;Light-related;CGGATA
>3AF1-box;Light-related;AAATAGATAAATAAAAACATT
>B-box;Light-related;AAACGACACCGTTT
>L-box;Light-related;AAATTAACCAA
>PI;Light-related;GTGATCAC
>PII;Light-related;TTGGTTTTGATCAAAACCAA
>Light HSE;Light-related;GAANNTCC
>I-box;Light-related;GATAAGR
>MYB4 bs;Light-related;AMCWAMC
>Box II;Light-related;GTGTGGTTAATATG
>Z-DNA-forming sequence;Light-related;ATACGTGT
>Box III;Light-related;ATCATTTTCACT
>RE1;Light-related;CATGGGCGCGG
>MRE;Light-related;TCTAACCTACCA
>PIF3 bs;Light-related;GDDRVMCACGTGRVVNSB
>HSE i;Heat-related;AGAANNTTCT
>HSE ii;Heat-related;GAANNTTCNNGAA
>HSE iii;Heat-related;CTNGAANNTTCNAG
>HSE iv;Heat-related;TTCNNGAANNNNNNNGAA
>HSE v;Heat-related;TTCNNNGAANNNNNNNGAA
>HSE vi;Heat-related;TTCNNNNGAANNNNNNNGAA
>HSE vii;Heat-related;TTCNNNTTCNNNNNNNNTTC
>HSE viii;Heat-related;TTCNNTTCNNNNNNNNNNTTCNNNTC
>HSAS;Heat-related;GGGTGTC
>ERF1 bs;Heat-related;RCCGAC
>DREB2A CRT/DRE;Heat-related;RCCGAC
>DREB2A CRT/DRE ii;Heat-related;TACTRCCGACAYGA
>AZRE;Heat-related;GTCCTGGAC
>STRE i;Heat-related;TGGGAAGGGGCACGACGAG
>STRE ii;Heat-related;AGAGGGGTTAATCGAGATG
>STRE iii;Heat-related;AGGGG
>Site II;Heat-related;TGGGCY
>OsAREB1 bs;Heat-related;ACGTGCC
>AT-rich sequence i;Heat-related;TTAAAAAGTTAAT
>AT-rich sequence ii;Heat-related;TAAATTTAAAAATGTTTT
>AT-rich sequence iii;Heat-related;TTAAAACTTTAAA
>AT-rich sequence iv;Heat-related;TATATTATAATTTTATATAA
>AT-rich sequence v;Heat-related;AATATTTCAAATATAAT
>AT-rich sequence vi;Heat-related;ATAAAAAATAATTGAA
>AT-rich sequence vii;Heat-related;AATAAAATCTAAAAA
>AT-rich sequence viii;Heat-related;ATTTAAATTTTTAA
>MBF1c bs;Heat-related;CTAGA
>CCAAT-box;Heat-related;CCAAT
>CRT/DRE;Cold-related;RYCGAC
>Ppdhn1 DRE;Cold-related;CCCGAC
>DRE-like;Cold-related;DRCCGACNW
>DREB1B/CBF1 and DREB1C/CBF2 bs;Cold-related;AYKRCCGACMT
>DREB1A/CBF3 bs i;Cold-related;TACTRCCGACATGA
>DREB1A/CBF3 bs ii;Cold-related;RCCGACNT
>DREB1C/CBF2 bs putative i;Cold-related;AGNCGNCT
>DREB1C/CBF2 bs putative ii;Cold-related;CACMACAC
>DREB1C/CBF2 bs putative iii;Cold-related;CAAGTTGR
>DREB1C/CBF2 bs putative iv;Cold-related;CGAWCYAG
>DREB1C/CBF2 bs putative v;Cold-related;CTTTGCCT
>DREB1C/CBF2 bs putative vi;Cold-related;TTCNGAGT
>rab28 ABRE;Cold-related;CCACGTGG
>LTRE;Cold-related;CCGAAA
>TYNY2 bs;Cold-related;TACTRCCGACAT
>EE i;Cold-related;ATATCM
>EE ii;Cold-related;GATATT
>GT-1 bs;Cold-related;GRWAAW
>WRKY bs;Cold-related;YTGACY
>ABRE-related;Cold-related;MACGYGB
>Gma ABRE;Cold-related;ACACGT
>OsABRE i;Cold-related;ACGTAC
>OsABRE ii;Cold-related;GTACGT
>MYBC1 bs;Cold-related;NHAGATHCKNN
>At ABRE;Cold-related;BACGTGKM
>Gma T/G-box;Cold-related;CACGTT
>Gma CE3 i;Cold-related;ACGCGT
>Gma CE3 ii;Cold-related;CGCGTT
>Osa cold Novel i;Cold-related;GTAGTA
>Osa cold Novel ii;Cold-related;CGTACG
>Gma cold Novel i;Cold-related;CCGTGT
>Gma cold Novel ii;Cold-related;AACACG
>CG-1 element i;Cold-related;TAAAMCGCGSAACA
>CGCG-box;Cold-related;TCGCGA
>CG-1 element ii;Cold-related;VCGCGB
>CM1;Cold-related;GACCMCA
>CM3;Cold-related;AGAGAC
>CM6;Cold-related;AGATTCTCA
>ICEr1-like;Cold-related;CACCTGBCWBHT
>ICEr2-like i;Cold-related;ACTCCAGBR
>ICEr2-like ii;Cold-related;ACTCCGBG
>CM4;Cold-related;TCCACGTG
>CM5;Cold-related;CTTMGCTG
>CM7;Cold-related;GGGTMAAAG
>ARR5/7/15 bs;Cold-related;NGATT
>EIN3/EIL1-3 bs i;Cold-related;AYGHAYVY
>EIN3/EIL1-3 bs ii;Cold-related;AYGWAYCT
>EIN3/EIL1-3 bs iii;Cold-related;TTCAAGGGGGCATGTATCTTGAA
>as1/ocs element;Cold-related;TGACG
>OsROS-bZIP bs i;Cold-related;GATGA
>OsROS-bZIP bs ii;Cold-related;TTGATC
>RAV1-A i;Cold-related;MWGCAACAKWWA
>RAV1-A ii;Cold-related;CAACA
>RAV1-B i;Cold-related;WTCACCTGRSSY
>RAV1-B ii;Cold-related;CACCTG
>RAP2.6 CE1 bs;Cold-related;TGCCACCGG
>RAP2.6 GCC-box bs;Cold-related;AGCCGCC
>ZAT10 bs i;Cold-related;ACTAGTGTANNNNNNNNNNNNNTCTAGTAAG
>ZAT10 bs ii;Cold-related;AGTNNNNNNNNNNNNNNNNNNNAGT
>ZAT10 bs iii;Cold-related;ASTNNNAST
>ZAT10 bs iv;Cold-related;ASTNNNNAST
>ZAT10 bs v;Cold-related;TTGACAGTGTCACTTGACAGTGTAC
>LOS2 bs;Cold-related;TNNCGCNNNNTATAAAAGCCGNNTTTT
>ZAT12 bs putative i;Cold-related;TCSNCTCS
>ZAT12 bs putative ii;Cold-related;GCATTGAC
>ZAT12 bs putative iii;Cold-related;YCTCTTCA
>ZAT12 bs putative iv;Cold-related;CAATGMKG
>ZAT12 bs putative v;Cold-related;TGAGGTCA
>ZAT12 bs putative vi;Cold-related;RSAATGAG
>ZAT12 bs putative vii;Cold-related;MCAACTTS
>ZAT12 bs putative viii;Cold-related;AWGAKGWC
>ZAT12 bs putative ix;Cold-related;ACAWMTTC
>ZAT12 bs putative x;Cold-related;TATCCAAA
>ZAT12 bs putative xi;Cold-related;GAMTAAGA
>ZAT12 bs putative xii;Cold-related;TAYGCCAG
>AtHAP5 bs;Cold-related;CCAAT
>Pp novel i;Cold-related;TACGTSGS
>Pp novel ii;Cold-related;TGTGTGYS
>Pp novel iii;Cold-related;CTAGAASY
>HOS9 bs;Cold-related;VCKCGT
>TaNAC69 bs i;Cold-related;RRWRGCGTRTRKTWYACGTAAYY
>TaNAC69 bs ii;Cold-related;RGTSKTTAWCYTTTRYACGTMWCT
>NAC072 bs;Cold-related;CATGTG
>ICE1 bs i;Cold-related;CACATG
>ICE1 bs ii;Cold-related;HCCACGT
>ICE1 bs iii;Cold-related;HACACGT
>MYB15 bs i;Cold-related;CRACGGTAGGTGG
>MYB15 bs ii;Cold-related;GKTWGKTR
>TA5 box;Cold-related;TATCCT
>TA4 box;Cold-related;TATCAC
>TA1 box;Cold-related;TATCCA
>TA3 box;Cold-related;TATCCG
>TA2 box;Cold-related;TATCCC
>MYB bs;Cold-related;TAACTG
>AuxRE i;Auxin-related;TGTCTC
>AuxRE ii;Auxin-related;GGTCCRT
>AuxRE iv;Auxin-related;CTTGTCTCCCA
>OBF bs;Auxin-related;ATCTTATGTCATTGATGACGACCTCC
>PHRA bs;Auxin-related;TAATTGACTCAATTA
>SGBFs bs;Auxin-related;TCCACGTGTC
>NtBBF1 bs;Auxin-related;ACTTTA
>TGA-box 1;Auxin-related;TGACGTAA
>Y region;Ethylene-related;TGTGACATTGAAATTCTTTGACTTTA
>ERF3/4 bs;Ethylene-related;TAAGAGCCGCCACT
>ERE;Ethylene-related;AWTTCAAA
>EIN3/EIL1-3 bs i;Ethylene-related;AYGHAYVY
>EIN3/EIL1-3 bs ii;Ethylene-related;TTCAAGGGGGCATGTATCTTGAA
>GCC-box;Ethylene-related;GCCGCC
>ERE ii;Ethylene-related;TAAGAGCCGCC
>GARE i;Gibberellin-related;AAACAGA
>GARE ii;Gibberellin-related;RTAACARANTCYGG
>GARE iii;Gibberellin-related;TAACRKA
>HvGAMYB bs;Gibberellin-related;YAACSRHM
>TATCCAC box;Gibberellin-related;TATCCAC
>Py-box;Gibberellin-related;TTTTTTCC
>P-box;Gibberellin-related;CCTTTKB
>CARE;Gibberellin-related;CAACTC
>RBE;Gibberellin-related;TCCAACTTGGA
>GA-DOWN seq.;Gibberellin-related;ACGTGTC
>ABRE i;Dehydration-related ABA-dependent;BACGTGKM
>ABRE ii;Dehydration-related ABA-dependent;CGCCACGT
>CE1;Dehydration-related ABA-dependent;TGCCACCGG
>CE3;Dehydration-related ABA-dependent;MACGCG
>CE1 i;Dehydration-related ABA-dependent;SYGCYYYY
>CE1 ii;Dehydration-related ABA-dependent;CRCCGCCCCS
>CE1 iii;Dehydration-related ABA-dependent;CGGTGCYBYY
>AtABI5 bs;Dehydration-related ABA-dependent;KMYACGTBR
>Zm/TaABI3 bs;Dehydration-related ABA-dependent;TCCATGCATGCAC
>ABRE-like;Dehydration-related ABA-dependent;CGGCGGCCTCGCCACG
>G-box;Dehydration-related ABA-dependent;CACGTG
>Ca2-RE;Dehydration-related ABA-dependent;MACGYGB
>Py-box;Dehydration-related ABA-dependent;TTTTTTCC
>ATHB6 bs;Dehydration-related ABA-dependent;CAATTATTG
>AtMYB2 bs;Dehydration-related ABA-dependent;CHAACNR
>AtMYB2 bs ii;Dehydration-related ABA-dependent;YCHAACNR
>MYB1 bs;Dehydration-related ABA-dependent;YCTAACTG
>JIN1 bs;Dehydration-related ABA-dependent;TGACACGT
>JAI1/JIN1 bs;Dehydration-related ABA-dependent;CACATG
>DBPF bs;Dehydration-related ABA-dependent;ACACNNG
>DBF1-2 bs;Dehydration-related ABA-dependent;ACCGAC
>CBF4 bs;Dehydration-related ABA-dependent;CCGAC
>TYNY2 bs ;Dehydration-related ABA-dependent;TACTRCCGACAT
>AtERF7 bs;Dehydration-related ABA-dependent;GCCGCC
>ALFIN1 bs;Dehydration-related;RRGGTGKGGS
>ERF1 bs;Dehydration-related ABA-independent;RCCGAC
>At CRT/DRE;Dehydration-related ABA-independent;CCGACT
>RD29A CRT/DRE;Dehydration-related ABA-independent;TACCGACAT
>DREB2A CRT/DRE;Dehydration-related ABA-independent;RCCGAC
>DREB2A CRT/DRE ii;Dehydration-related ABA-independent;TACTRCCGACAYGA
>ZFHD1 bs;Dehydration-related ABA-independent;CACTAAATTGTCAC
>TaNAC69 bs i;Dehydration-related ABA-independent;RRWRGCGTRTRKTWYACGTAAYY
>TaNAC69 bs ii;Dehydration-related ABA-independent;RGTSKTTAWCYTTTRYACGTMWCT
>NAC bs;Dehydration-related ABA-independent;ACACGCATGT
>as-1-like motif;Cytokinin-related;AAATGACGAAAATGC
>ARR1 bs;Cytokinin-related;AAGATY
>CPB sequence;Cytokinin-related;TATTAG
>EIRE;Biotic stress-related;TTGACC
>EIRE ii;Biotic stress-related;TTCGACC
>LeCp bs;Biotic stress-related;TAAAATAT
>PR-10a SEBF bs;Biotic stress-related;YTGTCWC
>JAI1/JIN1 bs;Biotic stress-related;CACATG
>JIN1 bs;Biotic stress-related; TGACACGT
>JAI1/JIN1 bs ii;Biotic stress-related;AACGTG
>GT-1 i;Biotic stress-related;GGTTAA
>GT-1 ii;Biotic stress-related;GAAAAA
>AtWRKY18 bs;Biotic stress-related;RGTCAAMG
>AtWRKY18 bs ii;Biotic stress-related;YTGACY
>SA sequence;Biotic stress-related;TTCGAC
>ERE;Biotic stress-related;TAAGAGCCGCC
>GCC-box;Biotic stress-related;GCCGCC
>TL1;Biotic stress-related;CTGAAGAAGAA
>TDBA12 bs;Biotic stress-related;TGACTTTCTGAC
>TacBBF bs;Biotic stress-related;ACTCTACAGTACTC
>HSRE;Biotic stress-related;CAAAATTTTGTA
>JA G-box ii;JA-related;AACGTG
>JA G-box;JA-related;CACGTGGC
>JA sequence;JA-related;AAATGTTGT
>JARE;JA-related;TGACG
>MeJARE;JA-related;GATACANNAATNTGATG
>JAI1/JIN1 bs;JA-related;CACATG
>JIN1 bs;JA-related; TGACACGT
>JAI1/JIN1 bs ii;JA-related;AACGTG
>MYB4 bs;JA-related;AMCWAMC
>GCC-box;JA-related;GCCGCC
>Stress RE;JA-related;TGGTAGGTGAGAT
>JERE;JA-related;CTCTTAGACCGCCTTCTTTGAAAG
>wound-inducible nuclear protein bs;Wounding-related;AAGCGTAAGT
>JARE;Wounding-related;TGACG
>MeJARE;Wounding-related;GATACANNAATNTGATG
>GCC-box;Wounding-related;GCCGCC
>JAI1/JIN1 bs;Wounding-related;CACATG
>WRE;Wounding-related;AAWGTATCSA
>Stress RE;Wounding-related;TGGTAGGTGAGAT
>AGP1 bs;Wounding-related;HCAGATCTAB
>ERF3 W-box;Wounding-related;TGACY
>WAR;Wounding-related;GTACGTGTTATAAAACGTGT
>TCA-1 bs;SA-related;TCATCTTCTT
>GT-1;SA-related;GGTTAA
>GT-1 ii;SA-related;GAAAAA
>TCA;SA-related;TCAGAAGAGG
>TCA-element;SA-related;CCATCTTTTT
>OBP bs;SA-related;TACACTTTTGG
>MYB4 bs;SA-related;AMCWAMC
>SA sequence;SA-related;TTCGAC
>OBP3 bs;SA-related;WAAAG
>OBF bs;SA-related;ATCTTATGTCATTGATGACGACCTCC
>AtWRKY18 bs;SA-related;RGTCAAMG
>AtWRKY18 bs ii;SA-related;TTGACY
>SARE;SA-related;CTGACGTAAGGGATGACGCAC
>SRE;Sugar response-related;TTATCC
>Sugar reppression E;Sugar response-related;TACGTA
>Sucrose box;Sugar response-related;NNAATCA
>Suc RE;Sugar response-related;AATAGAAAA
>Suc RE ii;Sugar response-related;AATACTAAT
>Sugar RE;Sugar response-related;AAAACTAAGAAAGACCGATGGAAAA
>UPRE;UPR-related;CCNNNNNNNNNNNNCCACG
>UPRE ii;UPR-related;ATTGGTCCACG
>UPRE iii;UPR-related;CCACGTCATG
>ARE;Oxidative signalling-related;TGASTCAG
>OsROS-bZIP bs i;Oxidative signalling-related;GATGA
>OsROS-bZIP bs ii;Oxidative signalling-related;TTGATC
>GCC-box;Oxidative signalling-related;GCCGCC
>as1/ocs element;Oxidative signalling-related;TGACG
>ARE ii;Oxidative signalling-related;GTGACNNNGC
>ZAP1 bs ;Miscellaneous group;TTGACCGAG
>ATBH-1/HAT5 bs;Miscellaneous group;CAATTATTG
>ATBH5 bs;Miscellaneous group;BSYSCAATTATTG
>ATBH9 bs;Miscellaneous group;AAHYGTAATGATTRCWYBS
>Pro/Hypoosm.-RE;Miscellaneous group;ACTCAT
>AtMYB84 bs;Miscellaneous group;GGGGGGTAGGTGS
>AtMYB77 bs;Miscellaneous group;MADYGACRGTTRS
>HAHB4 bs;Miscellaneous group;TAATRATTG
>ARR2 bs;Miscellaneous group;TYTWKGATTGTS
>ARR10 bs;Miscellaneous group;GSKWAGATHYKC
>PCF5 bs;Miscellaneous group;GTGGYCCCSY
>OsCBT bs;Miscellaneous group;TMCGYGTKKKKTKCG
>PCF2 bs;Miscellaneous group;TGGGSCCCAC
>CAD1-A W-box;Miscellaneous group;AGTCAAAATTGACC
>RSRE;Miscellaneous group;CGCGTT
>Type IIG Myb bs;Miscellaneous group;GKTWGGTR
>Type I Myb bs;Miscellaneous group;CNGTTR
>Type II Myb bs;Miscellaneous group;GKTWGTTR
>Sulfur RE;Miscellaneous group;GAGACA
>MRE;Miscellaneous group;TGCRCNC
>PHO-like element;Miscellaneous group;GDHGTGG
>PHR1 bs;Miscellaneous group;GNATATNC
>AtMyb1 bs;Miscellaneous group;MTCCWACC
>AtMyb2 bs;Miscellaneous group;TAACSGTT
>AtMyb3 bs;Miscellaneous group;TAACTAAC
>Plant MYB bs;Miscellaneous group;MACCWAMC
>GBF1 bs / G-box;Miscellaneous group;CCACGTGG
>GBF1 bs;Miscellaneous group;TGACGTGT
>TGA1a bs;Miscellaneous group;SHSACGTSWS
>Hex motif;Miscellaneous group;TGACGTGG
>STGA1/ST1-2 bs;Miscellaneus group;TGACGTGR
>CDC5 bs;Miscellaneus group;CTCAGCG
